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  "Package": "UniprotR",
  "Title": "Retrieving Information of Proteins from Uniprot",
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  "Authors@R": "c(person(\"Mohamed\", \"Soudy\", email = \"MohmedSoudy2009@gmail.com\", role=c(\"aut\", \"cre\")), person(\"Ali\", \"Mostafa\", email = \"ali.mo.anwar@std.agr.cu.edu.eg\", role = \"aut\"))",
  "Author": "Mohamed Soudy [aut, cre], Ali Mostafa [aut]",
  "Maintainer": "Mohamed Soudy <MohmedSoudy2009@gmail.com>",
  "Description": "Connect to Uniprot <https://www.uniprot.org/> to retrieve\ninformation about proteins using their accession number such\ninformation could be name or taxonomy information, For detailed\ninformation kindly read the publication\n<https://www.sciencedirect.com/science/article/pii/S1874391919303859>.",
  "License": "GPL-3",
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  "URL": "https://github.com/Proteomicslab57357/UniprotR",
  "BugReports": "https://github.com/Proteomicslab57357/UniprotR/issues",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-15 09:36:55 UTC",
    "User": "root"
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  "Repository": "https://proteomicslab57357.r-universe.dev",
  "Date/Publication": "2022-09-18 06:39:36 UTC",
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      "date": "2021-04-06"
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      "version": "2.0.7",
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      "version": "2.0.8",
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  "_exports": [
    "ConstructGenesTree",
    "ConstructLocTree",
    "ConvertID",
    "Enrichment.BP",
    "Enrichment.CC",
    "Enrichment.KEGG",
    "Enrichment.MF",
    "Enrichment.REAC",
    "Get.diseases",
    "GetAccessionList",
    "GetExpression",
    "GetFamily_Domains",
    "GetGeneral_Information",
    "GetMiscellaneous",
    "GetNamesTaxa",
    "GetPathology_Biotech",
    "GetpdbStructure",
    "GetProteinAnnontate",
    "GetProteinFunction",
    "GetProteinGOInfo",
    "GetProteinInteractions",
    "GetproteinNetwork",
    "GetproteinNetwork_all",
    "GetProteomeFasta",
    "GetProteomeInfo",
    "GetPTM_Processing",
    "GetPublication",
    "GETSeqFastaUniprot",
    "GetSeqLength",
    "GetSequenceIso",
    "GetSequences",
    "GetStructureInfo",
    "GetSubcellular_location",
    "Goparse",
    "HandleBadRequests",
    "Pathway.Enr",
    "Plot.GOMolecular",
    "Plot.GOSubCellular",
    "PlotAcidity",
    "PlotCharge",
    "PlotChromosomeInfo",
    "PlotEnrichedGO",
    "PlotEnrichedPathways",
    "PlotGenesNetwork",
    "PlotGOAll",
    "PlotGOBiological",
    "PlotGoInfo",
    "PlotGoterms",
    "PlotGravy",
    "PlotPhysicochemical",
    "PlotproteinExist",
    "PlotProteinGO_bio",
    "PlotProteinGO_cel",
    "PlotProteinGO_molc",
    "PlotproteinStatus",
    "PlotProteinTaxa",
    "ProcessAcc"
  ],
  "_help": [
    {
      "page": "ConstructGenesTree",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "ConstructGenesTree"
      ]
    },
    {
      "page": "ConstructLocTree",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "ConstructLocTree"
      ]
    },
    {
      "page": "ConvertID",
      "title": "Connect and parse UniProt database identifiers information.",
      "topics": [
        "ConvertID"
      ]
    },
    {
      "page": "Enrichment.BP",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Enrichment.BP"
      ]
    },
    {
      "page": "Enrichment.CC",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Enrichment.CC"
      ]
    },
    {
      "page": "Enrichment.KEGG",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Enrichment.KEGG"
      ]
    },
    {
      "page": "Enrichment.MF",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Enrichment.MF"
      ]
    },
    {
      "page": "Enrichment.REAC",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Enrichment.REAC"
      ]
    },
    {
      "page": "Get.diseases",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "Get.diseases"
      ]
    },
    {
      "page": "GetAccessionList",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "GetAccessionList"
      ]
    },
    {
      "page": "GetExpression",
      "title": "Connect and parse UniProt Expression information.",
      "topics": [
        "GetExpression"
      ]
    },
    {
      "page": "GetFamily_Domains",
      "title": "Connect and parse UniProt Family Domains information.",
      "topics": [
        "GetFamily_Domains"
      ]
    },
    {
      "page": "GetGeneral_Information",
      "title": "Connect and parse UniProt General Information.",
      "topics": [
        "GetGeneral_Information"
      ]
    },
    {
      "page": "GetMiscellaneous",
      "title": "Connect and parse UniProt Miscellaneous information.",
      "topics": [
        "GetMiscellaneous"
      ]
    },
    {
      "page": "GetNamesTaxa",
      "title": "Connect and parse UniProt Names Taxa information.",
      "topics": [
        "GetNamesTaxa"
      ]
    },
    {
      "page": "GetPathology_Biotech",
      "title": "Connect and parse UniProt Pathology_Biotech information.",
      "topics": [
        "GetPathology_Biotech"
      ]
    },
    {
      "page": "GetpdbStructure",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "GetpdbStructure"
      ]
    },
    {
      "page": "GetProteinAnnontate",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "GetProteinAnnontate"
      ]
    },
    {
      "page": "GetProteinFunction",
      "title": "Connect and parse UniProt Protein Function information.",
      "topics": [
        "GetProteinFunction"
      ]
    },
    {
      "page": "GetProteinGOInfo",
      "title": "Connect and parse UniProt proteins gene ontology information.",
      "topics": [
        "GetProteinGOInfo"
      ]
    },
    {
      "page": "GetProteinInteractions",
      "title": "Connect and parse UniProt protein Interactions information.",
      "topics": [
        "GetProteinInteractions"
      ]
    },
    {
      "page": "GetproteinNetwork",
      "title": "Connect and parse stringdb information.",
      "topics": [
        "GetproteinNetwork"
      ]
    },
    {
      "page": "GetproteinNetwork_all",
      "title": "Connect and parse stringdb information.",
      "topics": [
        "GetproteinNetwork_all"
      ]
    },
    {
      "page": "GetProteomeFasta",
      "title": "Connect and DOWNLOAD Proteome info.",
      "topics": [
        "GetProteomeFasta"
      ]
    },
    {
      "page": "GetProteomeInfo",
      "title": "Connect and DOWNLOAD Proteome info.",
      "topics": [
        "GetProteomeInfo"
      ]
    },
    {
      "page": "GetPTM_Processing",
      "title": "Connect and parse UniProt PTM_Processsing information.",
      "topics": [
        "GetPTM_Processing"
      ]
    },
    {
      "page": "GetPublication",
      "title": "Connect and parse UniProt Publication about a protein information.",
      "topics": [
        "GetPublication"
      ]
    },
    {
      "page": "GETSeqFastaUniprot",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "GETSeqFastaUniprot"
      ]
    },
    {
      "page": "GetSeqLength",
      "title": "Connect and parse UniProt Sequences information.",
      "topics": [
        "GetSeqLength"
      ]
    },
    {
      "page": "GetSequenceIso",
      "title": "Connect and parse UniProt Sequences information.",
      "topics": [
        "GetSequenceIso"
      ]
    },
    {
      "page": "GetSequences",
      "title": "Connect and parse UniProt Sequences information.",
      "topics": [
        "GetSequences"
      ]
    },
    {
      "page": "GetStructureInfo",
      "title": "Connect and parse UniProt protein Structure information.",
      "topics": [
        "GetStructureInfo"
      ]
    },
    {
      "page": "GetSubcellular_location",
      "title": "Connect and parse UniProt protein Subcellular location information.",
      "topics": [
        "GetSubcellular_location"
      ]
    },
    {
      "page": "Goparse",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "Goparse"
      ]
    },
    {
      "page": "HandleBadRequests",
      "title": "Handle bad requests This Function is used to handle possible errors when trying to get url response.",
      "topics": [
        "HandleBadRequests"
      ]
    },
    {
      "page": "Pathway.Enr",
      "title": "Connect and parse UniProt information",
      "topics": [
        "Pathway.Enr"
      ]
    },
    {
      "page": "Plot.GOMolecular",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "Plot.GOMolecular"
      ]
    },
    {
      "page": "Plot.GOSubCellular",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "Plot.GOSubCellular"
      ]
    },
    {
      "page": "PlotAcidity",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotAcidity"
      ]
    },
    {
      "page": "PlotCharge",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotCharge"
      ]
    },
    {
      "page": "PlotChromosomeInfo",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotChromosomeInfo"
      ]
    },
    {
      "page": "PlotEnrichedGO",
      "title": "Connect and parse UniProt information",
      "topics": [
        "PlotEnrichedGO"
      ]
    },
    {
      "page": "PlotEnrichedPathways",
      "title": "Connect and parse UniProt information",
      "topics": [
        "PlotEnrichedPathways"
      ]
    },
    {
      "page": "PlotGenesNetwork",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGenesNetwork"
      ]
    },
    {
      "page": "PlotGOAll",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGOAll"
      ]
    },
    {
      "page": "PlotGOBiological",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGOBiological"
      ]
    },
    {
      "page": "PlotGoInfo",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGoInfo"
      ]
    },
    {
      "page": "PlotGoterms",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGoterms"
      ]
    },
    {
      "page": "PlotGravy",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotGravy"
      ]
    },
    {
      "page": "PlotPhysicochemical",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotPhysicochemical"
      ]
    },
    {
      "page": "PlotproteinExist",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotproteinExist"
      ]
    },
    {
      "page": "PlotProteinGO_bio",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotProteinGO_bio"
      ]
    },
    {
      "page": "PlotProteinGO_cel",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotProteinGO_cel"
      ]
    },
    {
      "page": "PlotProteinGO_molc",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotProteinGO_molc"
      ]
    },
    {
      "page": "PlotproteinStatus",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotproteinStatus"
      ]
    },
    {
      "page": "PlotProteinTaxa",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "PlotProteinTaxa"
      ]
    },
    {
      "page": "ProcessAcc",
      "title": "Connect and parse UniProt information.",
      "topics": [
        "ProcessAcc"
      ]
    }
  ],
  "_readme": "https://github.com/proteomicslab57357/uniprotr/raw/HEAD/README.md",
  "_rundeps": [
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